#virus=Human immunodeficiency virus 1 #cell type=BTO:0000089 (plus more specific tissues) Study Virus Tissue Tissue ID Cell Line Cell Line ID Platform Study Title Virus Samples Usable Virus Samples Control Samples Usable Control Samples Significant Genes Up Down GSE58994 Human immunodeficiency virus 1 peripheral blood mononuclear cell BTO:0001025 HuGene-2_0-st Expression data from primary human leukocytes (peropheral blood mononuclear cells, PBMC) cultured in vitro with HIV-1MN, HIV-2NIH-Z, CpG-A ODN or media alone 6 6 6 6 424 358 66 GSE125686 Human immunodeficiency virus 1 natural killer cell BTO:0000914 RNA-Seq Transcriptomic profiling of peripheral blood NK cells of chronic HBV, HCV and HIV patients 6 6 16 16 218 19 199 GSE81327 Human immunodeficiency virus 1 macrophage BTO:0000801 HuGene-2_1-st Early response of human monocyte-derived macrophages (MDM) to HIV-1 6 6 6 6 1 1 0 GSE33706 Human immunodeficiency virus 1 non-Hodgkin lymphoma cell line BTO:0002904 HG-U133_Plus_2 HIV-1 TAT SUPPRESSES THE TCR/CD3 MACHINERY IN HUMAN CD4+ T CELLS [HIV] 2 2 2 2 0 0 0 GSE53993 Human immunodeficiency virus 1 helper T-lymphocyte BTO:0002417 RNA-Seq Comparative total RNA and mRNA sequencing and systems analysis reveals nascent transcriptional response to early HIV-1 infection in a CD4+ T cell line 6 6 10 10 0 0 0 GSE59991 Human immunodeficiency virus 1 macrophage BTO:0000801 HuGene-1_0-st-v1 Expression data from in vitro HIV-1-infected macrophages responding to phagocytic stimuli 3 3 3 3 0 0 0 GSE74016 Human immunodeficiency virus 1 T-lymphocyte cell line BTO:0001045 RNA-Seq Dynamics of the human and viral m6A RNA methylomes during HIV-1 infection of T cells 2 2 2 2 0 0 0 GSE108897 Human immunodeficiency virus 1 macrophage BTO:0000801 HuEx-1_0-st-v2 HIV-1 indcued genes in human monocyte-derived macrophages 5 5 5 5 0 0 0 GSE511 Human immunodeficiency virus 1 peripheral blood mononuclear cell BTO:0001025 Unknown Proliferating normal human peripheral blood mononuclear cells infected with HIV type 1 RF 12 0 18 0 -- -- -- GSE13395 Human immunodeficiency virus 1 macrophage BTO:0000801 Not Specified HIV-1 Activates Macrophages Independent of Toll-like Receptors 8 0 8 0 -- -- -- GSE23183 Human immunodeficiency virus 1 peripheral blood mononuclear cell BTO:0001025 HG-U133_Plus_2 Differential Gene Expression of Soluble CD8+ T-cell mediated suppression of HIV replication in three older children 3 3 0 0 -- -- -- GSE58418 Human immunodeficiency virus 1 promonocytic leukemia cell line BTO:0005583 RNA-Seq The ribonuclease activity of SAMHD1 is required for HIV-1 restriction 2 1 4 3 -- -- -- GSE71290 Human immunodeficiency virus 1 macrophage BTO:0000801 HG-U133_Plus_2 Fibrocytes differ from macrophages but can be infected with HIV-1 1 1 1 1 -- -- -- GSE73853 Human immunodeficiency virus 1 T-lymphocyte BTO:0000782 RNA-Seq Transcriptome analysis of diverse cell types infected with human cytomegalovirus [RNA-Seq] 1 1 1 1 -- -- -- GSE109554 Human immunodeficiency virus 1 monocyte-derived dendritic cell BTO:0002900 HuGene-2_1-st NONO detects the nuclear HIV capsid to promote cGAS-mediated innate immune activation 6 0 6 0 -- -- -- GSE109792 Human immunodeficiency virus 1 peripheral blood mononuclear cell BTO:0001025 HTA-2_0 Gene Expression during Panobinostat Dosing 15 15 0 0 -- -- -- GSE115449 Human immunodeficiency virus 1 peripheral blood mononuclear cell BTO:0001025 RNA-Seq RNA-seq of HIV bnAb and control individuals PBMC 46 46 0 0 -- -- --