#virus=All #cell type=BTO:0001025 Study Virus Tissue Tissue ID Cell Line Cell Line ID Platform Study Title Virus Samples Usable Virus Samples Control Samples Usable Control Samples Significant Genes Up Down GSE152418 Severe acute respiratory syndrome-related coronavirus peripheral blood mononuclear cell BTO:0001025 RNA-Seq Systems biological assessment of immunity to severe and mild COVID-19 infections 17 17 17 17 911 483 428 GSE68479 Rhinovirus A peripheral blood mononuclear cell BTO:0001025 HuGene-1_0-st-v1 Virograms for prediction of predisposition to asthma exacerbation 23 23 23 23 561 382 179 GSE85599 Human gammaherpesvirus 4 peripheral blood mononuclear cell BTO:0001025 HTA-2_0 Whole transcriptome profiling reveals major cell types in the cellular immune response against acute and chronic active Epstein-Barr virus infection 11 11 6 5 490 182 308 GSE58994 Human immunodeficiency virus 1 peripheral blood mononuclear cell BTO:0001025 HuGene-2_0-st Expression data from primary human leukocytes (peropheral blood mononuclear cells, PBMC) cultured in vitro with HIV-1MN, HIV-2NIH-Z, CpG-A ODN or media alone 6 6 6 6 424 358 66 GSE58994 Human immunodeficiency virus 2 peripheral blood mononuclear cell BTO:0001025 HuGene-2_0-st Expression data from primary human leukocytes (peropheral blood mononuclear cells, PBMC) cultured in vitro with HIV-1MN, HIV-2NIH-Z, CpG-A ODN or media alone 6 6 6 6 319 304 15 GSE106963 Rhinovirus A peripheral blood mononuclear cell BTO:0001025 HuGene-2_1-st Rhinovirus infection of polarized human macrophages induces differential gene expression 4 4 5 5 251 242 9 GSE60153 Rhinovirus A peripheral blood mononuclear cell BTO:0001025 HuGene-1_0-st-v1 Towards a PBMC "virogram assay" for precision medicine: concordance between ex vivo and in vivo viral infection transcriptomes 4 4 4 4 118 98 20 GSE34205 Human orthopneumovirus peripheral blood mononuclear cell BTO:0001025 HG-U133_Plus_2 Transcriptional profile of PBMCs in patients with acute RSV or Influenza infection 51 50 22 22 106 85 21 GSE34205 Influenza A virus peripheral blood mononuclear cell BTO:0001025 HG-U133_Plus_2 Transcriptional profile of PBMCs in patients with acute RSV or Influenza infection 28 28 22 22 99 92 7 GSE40184 Hepacivirus C peripheral blood mononuclear cell BTO:0001025 HG-U133A The blood transcriptional signature of chronic HCV [Affymetrix data] 10 10 6 6 85 17 68 GSE119117 Hepacivirus C peripheral blood mononuclear cell BTO:0001025 RNA-Seq Longitudinal transcriptomic characterization of the immune response to acute hepatitis C virus infection 39 39 14 14 0 0 0 GSE131504 Pegivirus C peripheral blood mononuclear cell BTO:0001025 RNA-Seq Characterization of Human Pegivirus Infection in Liver Transplantation Recipients 3 3 3 3 0 0 0 GSE511 Human immunodeficiency virus 1 peripheral blood mononuclear cell BTO:0001025 Unknown Proliferating normal human peripheral blood mononuclear cells infected with HIV type 1 RF 12 0 18 0 -- -- -- GSE23183 Human immunodeficiency virus 1 peripheral blood mononuclear cell BTO:0001025 HG-U133_Plus_2 Differential Gene Expression of Soluble CD8+ T-cell mediated suppression of HIV replication in three older children 3 3 0 0 -- -- -- GSE76137 Human gammaherpesvirus 4 peripheral blood mononuclear cell BTO:0001025 HG-U133_Plus_2 Metabolic stress is a barrier to Epstein-Barr virus mediated B-cell immortalization 6 6 0 0 -- -- -- GSE81246 Human betaherpesvirus 5 peripheral blood mononuclear cell BTO:0001025 HuGene-2_1-st Efficient immune responses in immunocompetent individuals developing symptomatic CMV infection 36 0 12 0 -- -- -- GSE82160 Primate T-lymphotropic virus 1 peripheral blood mononuclear cell BTO:0001025 HuGene-1_0-st-v1 FAS signalling in retroviral neuroinflammation 9 0 0 0 -- -- -- GSE104597 Hepacivirus C peripheral blood mononuclear cell BTO:0001025 HuGene-2_0-st Rapid reversal of innate immune dysregulation in blood of patients and liver of humanized mice with HCV following DAA therapy 9 9 0 0 -- -- -- GSE109792 Human immunodeficiency virus 1 peripheral blood mononuclear cell BTO:0001025 HTA-2_0 Gene Expression during Panobinostat Dosing 15 15 0 0 -- -- -- GSE115449 Human immunodeficiency virus 1 peripheral blood mononuclear cell BTO:0001025 RNA-Seq RNA-seq of HIV bnAb and control individuals PBMC 46 46 0 0 -- -- -- GSE123541 Zika virus peripheral blood mononuclear cell BTO:0001025 RNA-Seq Genome-wide RNA-seq and ATAC-seq analysis of an in vivo human immune response to acute Zika virus infection 4 0 0 0 -- -- --