#virus=Human gammaherpesvirus 4 #cell type=All (plus more specific tissues) Study Virus Tissue Tissue ID Cell Line Cell Line ID Platform Study Title Virus Samples Usable Virus Samples Control Samples Usable Control Samples Significant Genes Up Down GSE125974 Human gammaherpesvirus 4 B-lymphocyte BTO:0000776 RNA-Seq RNA-seq analysis of EBV transformation of primary resting B cells 18 18 3 3 5658 4239 1419 GSE49628 Human gammaherpesvirus 4 B-lymphocyte BTO:0000776 HG-U133_Plus_2 Large-scale hypomethylated blocks associated with Epstein-Barr virus-induced B-cell immortalization [Expression Array] 3 3 3 3 1285 807 478 GSE45829 Human gammaherpesvirus 4 B-lymphocyte BTO:0000776 HuEx-1_0-st-v2 Induction of interferon-stimulated genes on the IL-4 response axis by Epstein-Barr virus infected human B cells; relevance to cellular transformation. 3 3 3 3 941 719 222 GSE85599 Human gammaherpesvirus 4 peripheral blood mononuclear cell BTO:0001025 HTA-2_0 Whole transcriptome profiling reveals major cell types in the cellular immune response against acute and chronic active Epstein-Barr virus infection 11 11 6 5 490 182 308 GSE20200 Human gammaherpesvirus 4 B-lymphocyte BTO:0000776 HuEx-1_0-st-v2 Exon-Level Expression Data from Primary B Cells, Early Proliferating EBV-infected B Cells and Lymphoblastoid Cell Lines 4 4 4 4 74 52 22 GSE13906 Human gammaherpesvirus 4 gamma delta T-lymphocyte BTO:0005607 HG-U133_Plus_2 NK-cell associated receptors expression in EBV-positive gamma-delta T cell lines. 4 4 4 4 10 3 7 GSE58914 Human gammaherpesvirus 4 keratinocyte cell line BTO:0000375 HG-U133_Plus_2 Expression data from Epstein-Barr virus infection of immortalized normal oral keratinocytes 2 2 4 4 1 1 0 GSE19761 Human gammaherpesvirus 4 Burkitt lymphoma cell line BTO:0000889 HG_U95Av2 Expression data from Epstein-Barr virus -positive and negative Akata Burkitt's Lymphoma Clones 3 3 3 3 0 0 0 GSE60873 Human gammaherpesvirus 4 RNA-Seq Transcriptome of EBV-infected gastric cancer cell lines 6 6 3 3 0 0 0 GSE81068 Human gammaherpesvirus 4 mammary epithelial cell line BTO:0002768 HT_HG-U133_Plus_PM Expression profile of Epstein Barr Virus infected mammary epithelial cells and Breast tumors 2 2 2 2 0 0 0 GSE17908 Human gammaherpesvirus 4 lymphoblastoid cell line BTO:0000773 HG-U133A_2 Differential gene expression patterns of EBV infected EBNA-3 positive and negative human B lymphocytes 5 5 0 0 -- -- -- GSE29301 Human gammaherpesvirus 4 lymphoblastoid cell line BTO:0000773 HuEx-1_0-st-v2 Exon-Level Expression Data from Primary Human B Cells and Lymphoblastoid Cell Lines (LCLs) on HuEx and U133 2.0 plus Platforms 4 4 0 0 -- -- -- GSE29301 Human gammaherpesvirus 4 lymphoblastoid cell line BTO:0000773 HG-U133_Plus_2 Exon-Level Expression Data from Primary Human B Cells and Lymphoblastoid Cell Lines (LCLs) on HuEx and U133 2.0 plus Platforms 4 4 0 0 -- -- -- GSE46611 Human gammaherpesvirus 4 lymphoblastoid cell line BTO:0000773 RNA-Seq MicroRNA Target Site Identification by Integrating Sequence and Binding Information 1 1 0 0 -- -- -- GSE48918 Human gammaherpesvirus 4 lymphoblastoid cell line BTO:0000773 RNA-Seq Impact of genomic polymorphisms on the repertoire of human MHC class I-associated peptides 2 2 0 0 -- -- -- GSE53478 Human gammaherpesvirus 4 acute lymphoblastic leukemia cell line BTO:0002144 HG-U133_Plus_2 mRNA expression profiles in YT and NK92 cells 1 1 0 0 -- -- -- GSE53914 Human gammaherpesvirus 4 B-lymphocyte BTO:0000776 HuGene-1_0-st-v1 K1 and K15 of Kaposi sarcoma-associated herpes virus are functional homologues of latent membrane protein 2A of Epstein-Barr virus 4 4 0 0 -- -- -- GSE57862 Human gammaherpesvirus 4 lymphoblastoid cell line BTO:0000773 RNA-Seq High-resolution transcriptome analysis with long-read RNA sequencing 2 2 0 0 -- -- -- GSE67174 Human gammaherpesvirus 4 lymphoblastoid cell line BTO:0000773 RNA-Seq Proteogenomics-based identification of the repertoire of human MHC class I-associated peptides 4 4 0 0 -- -- -- GSE70513 Human gammaherpesvirus 4 gastric cancer cell BTO:0000498 RNA-Seq Latency expression of the Epstein-Barr virus-encoded MHC class I TAP inhibitor, BNLF2a in EBV-positive gastric carcinomas 2 2 0 0 -- -- -- GSE70513 Human gammaherpesvirus 4 gastric adenocarcinoma cell line BTO:0002380 RNA-Seq Latency expression of the Epstein-Barr virus-encoded MHC class I TAP inhibitor, BNLF2a in EBV-positive gastric carcinomas 2 2 0 0 -- -- -- GSE71045 Human gammaherpesvirus 4 cytotoxic T-lymphocyte BTO:0000289 HuGene-1_0-st-v1 Gene expression of CD8+ T cells isolated from human subjects during acute and convalescent phase of EBV infection 20 20 0 0 -- -- -- GSE73887 Human gammaherpesvirus 4 lymphoblastoid cell line BTO:0000773 RNA-Seq Identification of MEF2B, EBF1, and IL6R as chromosome bound targets of EBNA1 essential for EBV infected B-lymphocyte survival 2 2 0 0 -- -- -- GSE74289 Human gammaherpesvirus 4 lymphoblastoid cell line BTO:0000773 RNA-Seq Improved LCL to iPSC reprogramming: RNA Analysis of LCLs, reprogrammed iPSCs, and differentiated NSCs reveal potential regulatory and functional processes involved in these cellular transitions. 6 6 0 0 -- -- -- GSE76137 Human gammaherpesvirus 4 peripheral blood mononuclear cell BTO:0001025 HG-U133_Plus_2 Metabolic stress is a barrier to Epstein-Barr virus mediated B-cell immortalization 6 6 0 0 -- -- -- GSE84897 Human gammaherpesvirus 4 gastric adenocarcinoma cell line BTO:0002380 RNA-Seq Genome-wide analysis of DNA hydroxymethylation and methylation during epstein-barr virus infection. 3 3 1 1 -- -- -- GSE92521 Human gammaherpesvirus 4 lymphoblastoid cell line BTO:0000773 RNA-Seq Analysis of parent-of-origin bias in gene expression levels 165 165 0 0 -- -- -- GSE93709 Human gammaherpesvirus 4 Burkitt lymphoma cell line BTO:0000889 RNA-Seq Transcription factors operate across disease loci: EBNA2 in autoimmunity 1 1 1 1 -- -- -- GSE95634 Human gammaherpesvirus 4 B-lymphoma cell line BTO:0001518 RNA-Seq Global transcriptome analysis of BJAB cells that are modulated by EBV infection or (and) EBV BART6-3p mimics. 1 1 1 1 -- -- -- GSE102203 Human gammaherpesvirus 4 plasmablastic lymphoma cell BTO:0006150 HuGene-2_0-st Expression data from EBV+ and EBV- plasmablastic lymphomas 6 0 3 0 -- -- -- GSE113070 Human gammaherpesvirus 4 B-cell lymphoma cell BTO:0001690 RNA-Seq Role of Epstein-Barr Virus (EBV) latency protein EBNA3C in EBV-induced lymphomagenesis in a cord blood-humanized mouse model 2 0 0 0 -- -- -- GSE122751 Human gammaherpesvirus 4 gastric adenocarcinoma cell line BTO:0002380 RNA-Seq RNA sequencing data in AGS-BX1 cells treated with C7 2 2 0 0 -- -- -- GSE125420 Human gammaherpesvirus 4 diffuse large B-cell lymphoma cell BTO:0002521 HG-U133_Plus_2 Epstein-Barr Virus (EBV) inhibits palsma cell differentiation and apoptosis via activation of NKL homeobox gene HLX in DLBCL cell line DOHH-2 1 1 1 1 -- -- -- GSE132138 Human gammaherpesvirus 4 B-lymphocyte BTO:0000776 RNA-Seq Identification of Host Biomarkers of EBV Latency IIb and Latency III 4 4 0 0 -- -- --