Virus Expression Database

GSE102392

Transcriptome analysis of human airway epithelium infected by Human Bocavirus 1

Submitted by Jianming Qiu (University of Kansas Medical Center, USA) on Aug 09 2017

Platform: ngs – Illumina HiSeq 2500 (Homo sapiens)

Pubmed: 29021400, 30621044

Summary Human Bocavirus 1(HBoV1), which belongs to the genus Bocaparvovirus of the family Parvoviridae, infects well differentiated human airway epithelium which is at mitotically quiescent state. To systematicaly investigate the interaction between HBoV1 and primary human airway epithelium cultured at an air-liquid interface (HAE-ALI), RNA-seq was applied to study the transcriptome profile of HAE-ALI infected by HBoV1.

6 Samples

ID Title Cell Type Timepoint Reported Virus Virus Species Exclusion Reason
GSM2735953 mock infected HAE-1 tracheobronchial epithelial cell  7 days mock Uninfected
GSM2735954 mock infected HAE-2 tracheobronchial epithelial cell  7 days mock Uninfected
GSM2735955 mock infected HAE-3 tracheobronchial epithelial cell  7 days mock Uninfected
GSM2735956 HBoV1 infected HAE-1 tracheobronchial epithelial cell  7 days HBoV1 Primate bocaparvovirus 1
GSM2735957 HBoV1 infected HAE-2 tracheobronchial epithelial cell  7 days HBoV1 Primate bocaparvovirus 1
GSM2735958 HBoV1 infected HAE-3 tracheobronchial epithelial cell  7 days HBoV1 Primate bocaparvovirus 1