GSE102392

Transcriptome analysis of human airway epithelium infected by Human Bocavirus 1

Submitted by Jianming Qiu (University of Kansas Medical Center, USA) on Aug 09 2017

Platform: ngs – Illumina HiSeq 2500 (Homo sapiens)

Pubmed: 29021400, 30621044

Summary Human Bocavirus 1(HBoV1), which belongs to the genus Bocaparvovirus of the family Parvoviridae, infects well differentiated human airway epithelium which is at mitotically quiescent state. To systematicaly investigate the interaction between HBoV1 and primary human airway epithelium cultured at an air-liquid interface (HAE-ALI), RNA-seq was applied to study the transcriptome profile of HAE-ALI infected by HBoV1.

6 Samples

ID	Title	Cell Type	Timepoint	Reported Virus	Virus Species	Exclusion Reason
GSM2735953	mock infected HAE-1	tracheobronchial epithelial cell	7 days	mock	Uninfected
GSM2735954	mock infected HAE-2	tracheobronchial epithelial cell	7 days	mock	Uninfected
GSM2735955	mock infected HAE-3	tracheobronchial epithelial cell	7 days	mock	Uninfected
GSM2735956	HBoV1 infected HAE-1	tracheobronchial epithelial cell	7 days	HBoV1	Primate bocaparvovirus 1
GSM2735957	HBoV1 infected HAE-2	tracheobronchial epithelial cell	7 days	HBoV1	Primate bocaparvovirus 1
GSM2735958	HBoV1 infected HAE-3	tracheobronchial epithelial cell	7 days	HBoV1	Primate bocaparvovirus 1