Virus Expression Database

GSE117668

Expression data from in vitro healthy cells and malignant pleural mesothelioma cell lines infected by oncolytic attenuated measles virus or treated by exogenous type I interferon

Submitted by Franck Letourneur (INSERM, France) on Jul 25 2018

Platform: microarray – [HuGene-2_0-st] Affymetrix Human Gene 2.0 ST Array¬†[HuGene20stv1_Hs_ENTREZG_21.0.0]

Pubmed: None listed

Summary We used microarrays to analyse antiviral response by mesothelioma cells sensitive or resistant to the oncolytic activity of measles virus

48 Samples

ID Title Cell Type Timepoint Reported Virus Virus Species Exclusion Reason
GSM3305861 1-CEB NI lung epithelium cell line  48 hrs not infected Uninfected
GSM3305862 2-CEB MV lung epithelium cell line  48 hrs MV Measles morbillivirus
GSM3305863 3-CEB IFN lung epithelium cell line  48 hrs IFN Uninfected Extra interventions
IFN treated
GSM3305864 4-CCD19Lu NI lung fibroblast cell line  [CCD-19Lu ] 48 hrs not infected Uninfected
GSM3305865 5-CCD19Lu MV lung fibroblast cell line  [CCD-19Lu ] 48 hrs MV Measles morbillivirus
GSM3305866 6-CCD19Lu IFN lung fibroblast cell line  [CCD-19Lu ] 48 hrs IFN Uninfected Extra interventions
IFN treated
GSM3305867 7-HMVEC NI microvascular endothelial cell line  48 hrs not infected Uninfected
GSM3305868 8-HMVEC MV microvascular endothelial cell line  48 hrs MV Measles morbillivirus
GSM3305869 9-HMVEC IFN microvascular endothelial cell line  48 hrs IFN Uninfected Extra interventions
IFN treated
GSM3305870 10-MESF NI mesothelium  48 hrs not infected Uninfected
GSM3305871 11-MESF MV mesothelium  48 hrs MV Measles morbillivirus
GSM3305872 12-MESF IFN mesothelium  48 hrs IFN Uninfected Extra interventions
IFN treated
GSM3305873 13-meso 4 NI pleural mesothelioma cell  48 hrs not infected Uninfected
GSM3305874 14-meso 4 MV pleural mesothelioma cell  48 hrs MV Measles morbillivirus
GSM3305875 15-meso 4 IFN pleural mesothelioma cell  48 hrs IFN Uninfected Extra interventions
IFN treated
GSM3305876 16-meso 45 NI pleural mesothelioma cell  48 hrs not infected Uninfected
GSM3305877 17-meso 45 MV pleural mesothelioma cell  48 hrs MV Measles morbillivirus
GSM3305878 18-meso 45 IFN pleural mesothelioma cell  48 hrs IFN Uninfected Extra interventions
IFN treated
GSM3305879 19-meso 61 NI pleural mesothelioma cell  48 hrs not infected Uninfected
GSM3305880 20-meso 61 MV pleural mesothelioma cell  48 hrs MV Measles morbillivirus
GSM3305881 21-meso 61 IFN pleural mesothelioma cell  48 hrs IFN Uninfected Extra interventions
IFN treated
GSM3305882 22-meso 173 NI pleural mesothelioma cell  48 hrs not infected Uninfected
GSM3305883 23-meso 173 MV pleural mesothelioma cell  48 hrs MV Measles morbillivirus
GSM3305884 24-meso 173 IFN pleural mesothelioma cell  48 hrs IFN Uninfected Extra interventions
IFN treated
GSM3305885 25-meso 11 NI pleural mesothelioma cell  48 hrs not infected Uninfected
GSM3305886 26-meso 11 MV pleural mesothelioma cell  48 hrs MV Measles morbillivirus
GSM3305887 27-meso 11 IFN pleural mesothelioma cell  48 hrs IFN Uninfected Extra interventions
IFN treated
GSM3305888 28-meso 13 NI pleural mesothelioma cell  48 hrs not infected Uninfected
GSM3305889 29-meso 13 MV pleural mesothelioma cell  48 hrs MV Measles morbillivirus
GSM3305890 30-meso 13 IFN pleural mesothelioma cell  48 hrs IFN Uninfected Extra interventions
IFN treated
GSM3305891 31-meso 31 NI pleural mesothelioma cell  48 hrs not infected Uninfected
GSM3305892 32-meso 31 MV pleural mesothelioma cell  48 hrs MV Measles morbillivirus
GSM3305893 33-meso 31 IFN pleural mesothelioma cell  48 hrs IFN Uninfected Extra interventions
IFN treated
GSM3305894 34-meso 225 NI pleural mesothelioma cell  48 hrs not infected Uninfected
GSM3305895 35-meso 225 MV pleural mesothelioma cell  48 hrs MV Measles morbillivirus
GSM3305896 36-meso 225 IFN pleural mesothelioma cell  48 hrs IFN Uninfected Extra interventions
IFN treated
GSM3305897 37-Meso 47 NI pleural mesothelioma cell  48 hrs not infected Uninfected Data failed QC
pm_mean is 54.485039 (low signal, below threshold of 60)
GSM3305898 38-Meso 47 MV pleural mesothelioma cell  48 hrs MV Measles morbillivirus Data failed QC
pm_mean is 57.878346 (low signal, below threshold of 60)
GSM3305899 39-Meso 47 IFN pleural mesothelioma cell  48 hrs IFN Uninfected Extra interventions
IFN treated
GSM3305900 40-Meso 76 NI pleural mesothelioma cell  48 hrs not infected Uninfected Data failed QC
pm_mean is 49.309325 (low signal, below threshold of 60)
GSM3305901 41-Meso 76 MV pleural mesothelioma cell  48 hrs MV Measles morbillivirus Data failed QC
pm_mean is 56.436097 (low signal, below threshold of 60)
GSM3305902 42-Meso 76 IFN pleural mesothelioma cell  48 hrs IFN Uninfected Extra interventions
IFN treated
GSM3305903 43-Meso 96 NI pleural mesothelioma cell  48 hrs not infected Uninfected Data failed QC
pm_mean is 59.13332 (low signal, below threshold of 60)
GSM3305904 44-Meso 96 MV pleural mesothelioma cell  48 hrs MV Measles morbillivirus Data failed QC
pm_mean is 51.647331 (low signal, below threshold of 60)
GSM3305905 45-Meso 96 IFN pleural mesothelioma cell  48 hrs IFN Uninfected Extra interventions
IFN treated
GSM3305906 46-Meso 163 NI pleural mesothelioma cell  48 hrs not infected Uninfected Data failed QC
pm_mean is 63.622712 (low signal, below threshold of 60)
GSM3305907 47-Meso 163 MV pleural mesothelioma cell  48 hrs MV Measles morbillivirus Data failed QC
pm_mean is 53.650463 (low signal, below threshold of 60)
GSM3305908 48-Meso 163 IFN pleural mesothelioma cell  48 hrs IFN Uninfected Extra interventions
IFN treated