Virus Expression Database
Submitted by giancarlo russo (ETH University of Zurich, Switzerland) on Jun 26 2019
Platform: ngs – Illumina HiSeq 4000 (Homo sapiens)
Pubmed: 31391303
Summary Aim: Identify differentially expressed genes in human lung epithelial cells expressing a SUMOylation-deficient TRIM28 mutant (TRIM28 6KR) compared to TRIM28 wt.
| ID | Title | Cell Type | Timepoint | Reported Virus | Virus Species | Exclusion Reason |
|---|---|---|---|---|---|---|
| GSM3905824 | wt_TR28_mock_I | non-small cell lung adenocarcinoma cell line  [A-549  ] |
mock | Uninfected | ||
| GSM3905825 | wt_TR28_mock_II | non-small cell lung adenocarcinoma cell line [A-549 ] |
mock | Uninfected | ||
| GSM3905826 | wt_TR28_mock_III | non-small cell lung adenocarcinoma cell line [A-549 ] |
mock | Uninfected | ||
| GSM3905827 | wt_TR28_MOI10_I | non-small cell lung adenocarcinoma cell line [A-549 ] |
6 hrs | Influenza A virus | ||
| GSM3905828 | wt_TR28_MOI10_II | non-small cell lung adenocarcinoma cell line [A-549 ] |
6 hrs | Influenza A virus | ||
| GSM3905829 | wt_TR28_MOI10_III | non-small cell lung adenocarcinoma cell line [A-549 ] |
6 hrs | Influenza A virus | ||
| GSM3905830 | TR28_6KR_mock_I | non-small cell lung adenocarcinoma cell line [A-549 ] |
mock | Uninfected | Extra interventions mutant cells - TRIM28 |
|
| GSM3905831 | TR28_6KR_mock_II | non-small cell lung adenocarcinoma cell line [A-549 ] |
mock | Uninfected | Extra interventions mutant cells - TRIM28 |
|
| GSM3905832 | TR28_6KR_mock_III | non-small cell lung adenocarcinoma cell line [A-549 ] |
mock | Uninfected | Extra interventions mutant cells - TRIM28 |
|
| GSM3905833 | TR28_6KR_MOI10_I | non-small cell lung adenocarcinoma cell line [A-549 ] |
6 hrs | Influenza A virus | Extra interventions mutant cells - TRIM28 |
|
| GSM3905834 | TR28_6KR_MOI10_II | non-small cell lung adenocarcinoma cell line [A-549 ] |
6 hrs | Influenza A virus | Extra interventions mutant cells - TRIM28 |
|
| GSM3905835 | TR28_6KR_MOI10_III | non-small cell lung adenocarcinoma cell line [A-549 ] |
6 hrs | Influenza A virus | Extra interventions mutant cells - TRIM28 |