Submitted by David Redmond (Weill Cornell Medicine, USA) on Apr 15 2020
Platform: ngs – Illumina NovaSeq 6000 (Homo sapiens)
Pubmed: None listed
Summary We systematically probed which cell types in the colon are permissive to SARS-CoV-2 infection. Transcriptomic analysis following SARS-CoV-2 infection of hPSC-derived colon organoids revealed upregulation of chemokines but not type I/III interferon signaling. A large small molecule screen was also performed.
ID | Title | Cell Type | Timepoint | Reported Virus | Virus Species | Exclusion Reason |
---|---|---|---|---|---|---|
GSM4476794 | Mock infected colon cells, 1 | colon | Mock | Uninfected | ||
GSM4476795 | Mock infected colon cells, 2 | colon | Mock | Uninfected | ||
GSM4476796 | Infected cells for the study of SAR-CoV-2, 1 | colon | 24 hrs | sars-Cov2 | Severe acute respiratory syndrome-related coronavirus | |
GSM4476797 | Infected cells for the study of SAR-CoV-2, 2 | colon | 24 hrs | sars-Cov2 | Severe acute respiratory syndrome-related coronavirus |