Virus Expression Database
Submitted by Rasmus Moeller (Icahn School of Medicine at Mount Sinai, USA) on Dec 30 2020
Platform: ngs – Illumina NextSeq 500 (Homo sapiens)
Pubmed: 34022129
Summary Here we report the transcriptional response to SARS-CoV-2 in cornea, limbus and sclera from human cadaver donor tissue. All three tissues are characterized by an NFkB-mediated chemokine response to viral infection as well as type-I interferon stimulated genes.
| ID | Title | Cell Type | Timepoint | Reported Virus | Virus Species | Exclusion Reason |
|---|---|---|---|---|---|---|
| GSM4996084 | Cornea_mock_1 | cornea  |
Mock | Uninfected | ||
| GSM4996085 | Cornea_mock_2 | cornea |
Mock | Uninfected | ||
| GSM4996086 | Cornea_mock_3 | cornea |
Mock | Uninfected | ||
| GSM4996087 | Cornea_CoV2_1 | cornea |
SARS-CoV-2 | Severe acute respiratory syndrome-related coronavirus | ||
| GSM4996088 | Cornea_CoV2_2 | cornea |
SARS-CoV-2 | Severe acute respiratory syndrome-related coronavirus | ||
| GSM4996089 | Cornea_CoV2_3 | cornea |
SARS-CoV-2 | Severe acute respiratory syndrome-related coronavirus | ||
| GSM4996090 | Limbus_mock_1 | corneal epithelium |
Mock | Uninfected | ||
| GSM4996091 | Limbus_mock_2 | corneal epithelium |
Mock | Uninfected | ||
| GSM4996092 | Limbus_mock_3 | corneal epithelium |
Mock | Uninfected | ||
| GSM4996093 | Limbus_CoV2_1 | corneal epithelium |
SARS-CoV-2 | Severe acute respiratory syndrome-related coronavirus | ||
| GSM4996094 | Limbus_CoV2_2 | corneal epithelium |
SARS-CoV-2 | Severe acute respiratory syndrome-related coronavirus | ||
| GSM4996095 | Limbus_CoV2_3 | corneal epithelium |
SARS-CoV-2 | Severe acute respiratory syndrome-related coronavirus | ||
| GSM4996096 | Sclera_mock_1 | sclera |
Mock | Uninfected | ||
| GSM4996097 | Sclera_mock_2 | sclera |
Mock | Uninfected | ||
| GSM4996098 | Sclera_mock_3 | sclera |
Mock | Uninfected | ||
| GSM4996099 | Sclera_CoV2_1 | sclera |
SARS-CoV-2 | Severe acute respiratory syndrome-related coronavirus | ||
| GSM4996100 | Sclera_CoV2_2 | sclera |
SARS-CoV-2 | Severe acute respiratory syndrome-related coronavirus | ||
| GSM4996101 | Sclera_CoV2_3 | sclera |
SARS-CoV-2 | Severe acute respiratory syndrome-related coronavirus |