Virus Expression Database

GSE46518

Transcriptional and post-transcriptional analysis of CD4+ T cell clones deriving from HTLV-1 infected individuals

Submitted by franck mortreux (UMR5239, France) on Apr 30 2013

Platform: microarray – [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [transcript (gene) version]

Pubmed: 25205102

Summary T-cell clones were obtained by limiting dilution culture of PBMC of HTLV-1 carriers. Exon expression profiling was performed using Affymetrix exon array (Affymetrix Human Exon 1.0 ST Array) according to the manufacturer's instructions.

12 Samples

ID Title Cell Type Timepoint Reported Virus Virus Species Exclusion Reason
GSM1131687 ExVivo_TCD4+_HTLV1negative_2 T-lymphocyte  negative Uninfected
GSM1131688 ExVivo_TCD4+_HTLV1negative_1 T-lymphocyte  negative Uninfected
GSM1131689 ExVivo_TCD4+_HTLV1negative_4 T-lymphocyte  negative Uninfected
GSM1131690 ExVivo_TCD4+_HTLV1negative_3 T-lymphocyte  negative Uninfected
GSM1131691 ExVivo_TCD4+_HTLV1positive_5 T-lymphocyte  chronic HTLV1 Primate T-lymphotropic virus 1
GSM1131692 ExVivo_TCD4+_HTLV1positive_6 T-lymphocyte  chronic HTLV1 Primate T-lymphotropic virus 1
GSM1131693 ExVivo_TCD4+_HTLV1positive_4 T-lymphocyte  chronic HTLV1 Primate T-lymphotropic virus 1
GSM1131694 ExVivo_TCD4+_HTLV1positive_3 T-lymphocyte  chronic HTLV1 Primate T-lymphotropic virus 1
GSM1131695 ExVivo_TCD4+_HTLV1positive_2 T-lymphocyte  chronic HTLV1 Primate T-lymphotropic virus 1
GSM1131696 ExVivo_TCD4+_HTLV1positive_1 T-lymphocyte  chronic HTLV1 Primate T-lymphotropic virus 1
GSM1131697 ExVivo_TCD4+_HTLV1negative_6 T-lymphocyte  negative Uninfected
GSM1131698 ExVivo_TCD4+_HTLV1negative_5 T-lymphocyte  negative Uninfected