Virus Expression Database
Submitted by franck mortreux (UMR5239, France) on Nov 08 2013
Platform: microarray – [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
Pubmed: 25519886
Summary T-cell clones were obtained by limiting dilution culture of PBMC of HTLV-1 carriers. Exon expression profiling was performed using Affymetrix exon array (Affymetrix Human Exon 1.0 ST Array) according to the manufacturer's instructions. Gene version of CEL files 01 to 12 are presented in GSE46518.
| ID | Title | Cell Type | Timepoint | Reported Virus | Virus Species | Exclusion Reason |
|---|---|---|---|---|---|---|
| GSM1261741 | ExVivo_TCD4+_HTLV1negative_2 [exon level] | helper T-lymphocyte  |
negative | Uninfected | ||
| GSM1261742 | ExVivo_TCD4+_HTLV1negative_1 [exon level] | helper T-lymphocyte |
negative | Uninfected | ||
| GSM1261743 | ExVivo_TCD4+_HTLV1negative_4 [exon level] | helper T-lymphocyte |
negative | Uninfected | ||
| GSM1261744 | ExVivo_TCD4+_HTLV1negative_3 [exon level] | helper T-lymphocyte |
negative | Uninfected | ||
| GSM1261745 | ExVivo_TCD4+_HTLV1positive_5 [exon level] | helper T-lymphocyte |
chronic | HTLV1 | Primate T-lymphotropic virus 1 | |
| GSM1261746 | ExVivo_TCD4+_HTLV1positive_6 [exon level] | helper T-lymphocyte |
chronic | HTLV1 | Primate T-lymphotropic virus 1 | |
| GSM1261747 | ExVivo_TCD4+_HTLV1positive_4 [exon level] | helper T-lymphocyte |
chronic | HTLV1 | Primate T-lymphotropic virus 1 | |
| GSM1261748 | ExVivo_TCD4+_HTLV1positive_3 [exon level] | helper T-lymphocyte |
chronic | HTLV1 | Primate T-lymphotropic virus 1 | |
| GSM1261749 | ExVivo_TCD4+_HTLV1positive_2 [exon level] | helper T-lymphocyte |
chronic | HTLV1 | Primate T-lymphotropic virus 1 | |
| GSM1261750 | ExVivo_TCD4+_HTLV1positive_1 [exon level] | helper T-lymphocyte |
chronic | HTLV1 | Primate T-lymphotropic virus 1 | |
| GSM1261751 | ExVivo_TCD4+_HTLV1negative_6 [exon level] | helper T-lymphocyte |
negative | Uninfected | ||
| GSM1261752 | ExVivo_TCD4+_HTLV1negative_5 [exon level] | helper T-lymphocyte |
negative | Uninfected | ||
| GSM1261753 | ATLL cells_1 [exon level] | helper T-lymphocyte |
chronic | HTLV1 | Primate T-lymphotropic virus 1 | Extra interventions ATLL - lymphoma? |
| GSM1261754 | ATLL cells_2 [exon level] | helper T-lymphocyte |
chronic | HTLV1 | Primate T-lymphotropic virus 1 | Extra interventions ATLL - lymphoma? |
| GSM1261755 | ATLL cells_3 [exon level] | helper T-lymphocyte |
chronic | HTLV1 | Primate T-lymphotropic virus 1 | Extra interventions ATLL - lymphoma? |