Virus Expression Database
Submitted by Charny Park (Ewha Woman's Univ, South Korea) on Aug 28 2014
Platform: ngs – Illumina HiSeq 2000 (Homo sapiens)
Pubmed: 25254613
Summary To understand epigenic dysregulation of host and viral genes upon EBV infection in human gastric cancer, genome wide transcripts by RNAseq were undertaken for total RNAs of 3 EBVnGC, their isogenic cell lines converted by in vitro EBV-infection and 3 EBV-naturally infected GC cell lines.
| ID | Title | Cell Type | Timepoint | Reported Virus | Virus Species | Exclusion Reason |
|---|---|---|---|---|---|---|
| GSM1492704 | NCC-24 | gastric cancer cell line | "natural infection" | EBV | Human gammaherpesvirus 4 | |
| GSM1492705 | NUGC3 | gastric cancer cell line | none | Uninfected | ||
| GSM1492706 | NUGC3-EBV | gastric cancer cell line | unknown | EBV | Human gammaherpesvirus 4 | |
| GSM1492707 | SNU-484 | gastric cancer cell line | none | Uninfected | ||
| GSM1492708 | SNU-484-EBV | gastric cancer cell line | unknown | EBV | Human gammaherpesvirus 4 | |
| GSM1492709 | SNU-638 | gastric cancer cell line | none | Uninfected | ||
| GSM1492710 | SNU-638-EBV | gastric cancer cell line | unknown | EBV | Human gammaherpesvirus 4 | |
| GSM1492711 | SNU-719 | gastric cancer cell line | "natural infection" | EBV | Human gammaherpesvirus 4 | |
| GSM1492712 | YCCEL-1 | gastric cancer cell line | "natural infection" | EBV | Human gammaherpesvirus 4 |