Virus Expression Database

GSE67174

Proteogenomics-based identification of the repertoire of human MHC class I-associated peptides

Submitted by Diana Paola Granados (IRIC, Canada) on Mar 23 2015

Platform: ngs – Illumina HiSeq 2000 (Homo sapiens)

Pubmed: 26728094

Summary We have develop a proteogenomics-based approach for identification of human MHC class I-associated peptides, including those deriving from polymorphisms, mutations and non-canonical reading frames

4 Samples

ID Title Cell Type Timepoint Reported Virus Virus Species Exclusion Reason
GSM1641204 B-LCL-2.1 [re-analysis] lymphoblastoid cell line  EBV Human gammaherpesvirus 4
GSM1641205 B-LCL-2.2 [re-analysis] lymphoblastoid cell line  EBV Human gammaherpesvirus 4
GSM1641206 BLCL-3 lymphoblastoid cell line  EBV Human gammaherpesvirus 4
GSM1641207 BLCL-10 lymphoblastoid cell line  EBV Human gammaherpesvirus 4