GSE70513

Latency expression of the Epstein-Barr virus-encoded MHC class I TAP inhibitor, BNLF2a in EBV-positive gastric carcinomas

Submitted by Erik K Flemington (Tulane University, USA) on Jul 06 2015

Platform: ngs – Illumina HiSeq 2000 (Homo sapiens)

Pubmed: 26178981

Summary RNA Sequencing performed on EBV positive gastric cancer biopsies and cells lines to study expression of EBV specific genes.

4 Samples

ID	Title	Cell Type	Timepoint	Reported Virus	Virus Species	Exclusion Reason
GSM1808258	RNA-seq: Gastric Carcinoma Biopsy 1 - Bioserve	gastric cancer cell		EBV	Human gammaherpesvirus 4
GSM1808259	RNA-seq: Gastric Carcinoma Biopsy 2 - Bioserve	gastric cancer cell		EBV	Human gammaherpesvirus 4
GSM1808260	RNA-seq: Gastric Cancer Cell Line 1 - NCC24	gastric adenocarcinoma cell line  [SNU-NCC-24 ]		EBV	Human gammaherpesvirus 4
GSM1808261	RNA-seq: Gastric Cancer Cell Line 1 - YCCEL1	gastric adenocarcinoma cell line  [YCCEL1 ]		EBV	Human gammaherpesvirus 4