Virus Expression Database

GSE70513

Latency expression of the Epstein-Barr virus-encoded MHC class I TAP inhibitor, BNLF2a in EBV-positive gastric carcinomas

Submitted by Erik K Flemington (Tulane University, USA) on Jul 06 2015

Platform: ngs – Illumina HiSeq 2000 (Homo sapiens)

Pubmed: 26178981

Summary RNA Sequencing performed on EBV positive gastric cancer biopsies and cells lines to study expression of EBV specific genes.

4 Samples

ID Title Cell Type Timepoint Reported Virus Virus Species Exclusion Reason
GSM1808258 RNA-seq: Gastric Carcinoma Biopsy 1 - Bioserve gastric cancer cell  EBV Human gammaherpesvirus 4
GSM1808259 RNA-seq: Gastric Carcinoma Biopsy 2 - Bioserve gastric cancer cell  EBV Human gammaherpesvirus 4
GSM1808260 RNA-seq: Gastric Cancer Cell Line 1 - NCC24 gastric adenocarcinoma cell line  [SNU-NCC-24 ] EBV Human gammaherpesvirus 4
GSM1808261 RNA-seq: Gastric Cancer Cell Line 1 - YCCEL1 gastric adenocarcinoma cell line  [YCCEL1 ] EBV Human gammaherpesvirus 4