Virus Expression Database
Submitted by Tze Hau Lam (Singapore Immunology Network, Singapore) on Sep 08 2015
Platform: microarray – [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
Pubmed: None listed
Summary To determine host factors that regulate HBV, cells positive for and negative for HBV were compared.
We identified three transcription regulators (HNF4A1, HNFA2, HNFA3) that support HBV replication
| ID | Title | Cell Type | Timepoint | Reported Virus | Virus Species | Exclusion Reason |
|---|---|---|---|---|---|---|
| GSM1871890 | HepG2 | hepatoma cell line  [Hep-G2  ] |
none | Uninfected | ||
| GSM1871891 | Huh7 | hepatoma cell line [Huh-7 ] |
none | Uninfected | ||
| GSM1871892 | Hep3B | hepatoma cell line [Hep 3B2.1-7 ] |
HBV | Hepatitis B virus | ||
| GSM1871893 | PLC/PRF/5 | hepatoma cell line [PLC/PRF/5 ] |
HBV | Hepatitis B virus | ||
| GSM1871894 | Caco-2 | colonic adenocarcinoma cell line [Caco-2 ] |
none | Uninfected | ||
| GSM1871895 | Kato III | gastric cancer cell line [KATO III ] |
none | Uninfected | ||
| GSM1871896 | AGS | gastric adenocarcinoma cell line [AGS ] |
none | Uninfected | ||
| GSM1871897 | A549 | non-small cell lung adenocarcinoma cell line [A-549 ] |
none | Uninfected | ||
| GSM1871898 | 5637 | urinary bladder carcinoma cell line [5637 ] |
none | Uninfected | ||
| GSM1871899 | T24 | urinary bladder carcinoma cell line [T24 ] |
none | Uninfected | ||
| GSM1871900 | PC-3 | prostate cancer cell line [PC-3 ] |
none | Uninfected | ||
| GSM1871901 | Saos-2 | osteosarcoma cell line [SaOS-2 ] |
none | Uninfected | ||
| GSM1871902 | COLO316 | cystadenocarcinoma cell line [COLO 316 ] |
none | Uninfected | ||
| GSM1871903 | FS-04 | foreskin fibroblast cell line [FS-4 [Human foreskin] ] |
none | Uninfected |