Virus Expression Database

GSE72779

Expression data of HBV positive cells

Submitted by Tze Hau Lam (Singapore Immunology Network, Singapore) on Sep 08 2015

Platform: microarray – [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]

Pubmed: None listed

Summary To determine host factors that regulate HBV, cells positive for and negative for HBV were compared.
We identified three transcription regulators (HNF4A1, HNFA2, HNFA3) that support HBV replication

14 Samples

ID Title Cell Type Timepoint Reported Virus Virus Species Exclusion Reason
GSM1871890 HepG2 hepatoma cell line  [Hep-G2 ] none Uninfected
GSM1871891 Huh7 hepatoma cell line  [Huh-7 ] none Uninfected
GSM1871892 Hep3B hepatoma cell line  [Hep 3B2.1-7 ] HBV Hepatitis B virus
GSM1871893 PLC/PRF/5 hepatoma cell line  [PLC/PRF/5 ] HBV Hepatitis B virus
GSM1871894 Caco-2 colonic adenocarcinoma cell line  [Caco-2 ] none Uninfected
GSM1871895 Kato III gastric cancer cell line  [KATO III ] none Uninfected
GSM1871896 AGS gastric adenocarcinoma cell line  [AGS ] none Uninfected
GSM1871897 A549 non-small cell lung adenocarcinoma cell line  [A-549 ] none Uninfected
GSM1871898 5637 urinary bladder carcinoma cell line  [5637 ] none Uninfected
GSM1871899 T24 urinary bladder carcinoma cell line  [T24 ] none Uninfected
GSM1871900 PC-3 prostate cancer cell line  [PC-3 ] none Uninfected
GSM1871901 Saos-2 osteosarcoma cell line  [SaOS-2 ] none Uninfected
GSM1871902 COLO316 cystadenocarcinoma cell line  [COLO 316 ] none Uninfected
GSM1871903 FS-04 foreskin fibroblast cell line  [FS-4 [Human foreskin] ] none Uninfected