Virus Expression Database

GSE74016

Dynamics of the human and viral m6A RNA methylomes during HIV-1 infection of T cells

Submitted by Christopher E Mason (Weill Cornell Medical College, USA) on Oct 14 2015

Platform: ngs – Illumina HiSeq 2500 (Homo sapiens)

Pubmed: 27572442

Summary Significance of RNA methylation in the context of HIV-1 infection in human T cells

8 Samples

ID Title Cell Type Timepoint Reported Virus Virus Species Exclusion Reason
GSM1908205 MT4 Control 1 RNA-Seq T-lymphocyte cell line  [MT-4 ] Control Uninfected
GSM1908206 MT4 Control 1 MeRIP-Seq T-lymphocyte cell line  [MT-4 ] Wrong technology
MeRIP-Seq
GSM1908207 MT4 Control 2 RNA-Seq T-lymphocyte cell line  [MT-4 ] Control Uninfected
GSM1908208 MT4 Control 2 MeRIP-Seq T-lymphocyte cell line  [MT-4 ] Wrong technology
MeRIP-Seq
GSM1908209 MT4 HIV 1 RNA-Seq T-lymphocyte cell line  [MT-4 ] 12 hrs HIV-1 LAI Human immunodeficiency virus 1
GSM1908210 MT4 HIV 1 MeRIP-Seq T-lymphocyte cell line  [MT-4 ] 12 hrs Wrong technology
MeRIP-Seq
GSM1908211 MT4 HIV 2 RNA-Seq T-lymphocyte cell line  [MT-4 ] 12 hrs HIV-1 LAI Human immunodeficiency virus 1
GSM1908212 MT4 HIV 2 MeRIP-Seq T-lymphocyte cell line  [MT-4 ] 12 hrs Wrong technology
MeRIP-Seq